Credit Of Expenses Made By Emplyee To Savings Bank Account Is Taxable

As Mr. Dinesh advised please provide 2 different bills for your fees and reimbursement separately, They can deduct 10% only on fees and not on any other charges if it is specifically mentioned.
With regards to TDS already deducted for which you have received Form 16A, please consult your CA with your original bills of reimbursement, and they will guide you to claim the refund.