Nothing to worry !!!
Did you paid the deductions to EPFO?
If yes the only thing you have to do is deposit employee and employer contributions to epf account no 1. you can not deposit for eps.
Correct the ECR accordingly and visit your pf office edp dept & update the same.
If not paid; make the payment immediately with separate ECR challan.
Mail me for more clarification.
25th June 2015 From India, Chennai